PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID NNU_014413-RA
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo
Family bHLH
Protein Properties Length: 468aa    MW: 51424.1 Da    PI: 5.4785
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
NNU_014413-RAgenomeCASView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH14.75.4e-053593961254
                    HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
            HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                    R +++ +++  L++l+ +      +K + a++L +A+eYIk L
  NNU_014413-RA 359 RKEKLGDRITALQQLVSPF-----GKTDTASVLYEAIEYIKFL 396
                    677888999*******998.....8****************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088811.649347396IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474593.66E-11357414IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.28E-5357401No hitNo description
Gene3DG3DSA:4.10.280.103.7E-8361404IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 468 aa     Download sequence    Send to blast
MADEFQTGIC SGNWWNNPTR NGFNGGSSPC STALNDTGSF GWPAEMVDMK ARSCEESASA  60
SDSSTAFQDT QKPQVTDSVG GGGVLMDSTL QIMGFGLSSP TTMDWNQALL RSSGRAQTNF  120
HSVLQEELSS RPSFRQETGM ESQLQKEWSP KNFCGSGEDS SVNAFRQINQ VYALDQQSLN  180
SVNSSSDCTV TACQGLPTSF PMVSSSYGCT STLLQGLFEP DPQPQQSSLE NRSINFPPST  240
SYHMDPNELS PSWPKFSQLL RSLPPKQQPT NQLHFPNNVP FWNATAAAMN EVRPSYFPSS  300
QTQFLTPTFE EKPSCSNLTA KSSTEEVRDS ATAVKKGSSE AVFKRPRIET PPMPTFKVRK  360
EKLGDRITAL QQLVSPFGKT DTASVLYEAI EYIKFLHDQV SVLSTPYMKN GAPMQHQQQN  420
SNKSKEADGH KPDLRSRGLC LVPISSTFPV TNETTADFWT PTFGGTYR
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010267864.10.0PREDICTED: transcription factor bHLH112-like
TrEMBLD7SSM50.0D7SSM5_VITVI; Putative uncharacterized protein
STRINGVIT_00s0274g00070.t010.0(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20640.12e-68bHLH family protein